Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0233 | CC_1011 | CC_0233 | CC_1011 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.454 |
| CC_0233 | CC_1140 | CC_0233 | CC_1140 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.804 |
| CC_0233 | CC_3615 | CC_0233 | CC_3615 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.802 |
| CC_0233 | CC_3618 | CC_0233 | CC_3618 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | Mannose-1-phosphate guanylyltransferase; Identified by match to protein family HMM; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.467 |
| CC_0233 | gmd | CC_0233 | CC_1010 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.883 |
| CC_0233 | hfsE | CC_0233 | CC_2425 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | HfsE; Identified by Glimmer2; putative. | 0.412 |
| CC_0233 | hldD | CC_0233 | CC_1430 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | ADP-L-glycero-D-mannoheptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.767 |
| CC_0233 | per | CC_0233 | CC_1012 | Flagellin modification protein FlmA; Identified by match to protein family HMM. | Perosamine synthetase; Catalyzes the synthesis of GDP-perosamine from GDP-4-keto-6- deoxy-D-mannose and L-glutamate. Can use only L-glutamate as amino donor. In vitro, can also use GDP-4-keto-3,6-dideoxymannose to produce GDP-3-deoxyperosamine. Involved in the formation of S-LPS, which is required for attachment of the protein S-layer to the outer membrane surface. | 0.904 |
| CC_1011 | CC_0233 | CC_1011 | CC_0233 | Identified by match to protein family HMM. | Flagellin modification protein FlmA; Identified by match to protein family HMM. | 0.454 |
| CC_1011 | CC_1013 | CC_1011 | CC_1013 | Identified by match to protein family HMM. | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | 0.801 |
| CC_1011 | CC_1014 | CC_1011 | CC_1014 | Identified by match to protein family HMM. | Glycosyl transferase, group 1 family protein LpsE; Identified by match to protein family HMM. | 0.787 |
| CC_1011 | gmd | CC_1011 | CC_1010 | Identified by match to protein family HMM. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.858 |
| CC_1011 | hfsE | CC_1011 | CC_2425 | Identified by match to protein family HMM. | HfsE; Identified by Glimmer2; putative. | 0.792 |
| CC_1011 | per | CC_1011 | CC_1012 | Identified by match to protein family HMM. | Perosamine synthetase; Catalyzes the synthesis of GDP-perosamine from GDP-4-keto-6- deoxy-D-mannose and L-glutamate. Can use only L-glutamate as amino donor. In vitro, can also use GDP-4-keto-3,6-dideoxymannose to produce GDP-3-deoxyperosamine. Involved in the formation of S-LPS, which is required for attachment of the protein S-layer to the outer membrane surface. | 0.960 |
| CC_1013 | CC_1011 | CC_1013 | CC_1011 | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.801 |
| CC_1013 | CC_1014 | CC_1013 | CC_1014 | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | Glycosyl transferase, group 1 family protein LpsE; Identified by match to protein family HMM. | 0.802 |
| CC_1013 | gmd | CC_1013 | CC_1010 | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. | 0.840 |
| CC_1013 | hfsE | CC_1013 | CC_2425 | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | HfsE; Identified by Glimmer2; putative. | 0.489 |
| CC_1013 | per | CC_1013 | CC_1012 | Glycosyl transferase, group 1 family protein LpsD; Identified by match to protein family HMM. | Perosamine synthetase; Catalyzes the synthesis of GDP-perosamine from GDP-4-keto-6- deoxy-D-mannose and L-glutamate. Can use only L-glutamate as amino donor. In vitro, can also use GDP-4-keto-3,6-dideoxymannose to produce GDP-3-deoxyperosamine. Involved in the formation of S-LPS, which is required for attachment of the protein S-layer to the outer membrane surface. | 0.810 |
| CC_1014 | CC_1011 | CC_1014 | CC_1011 | Glycosyl transferase, group 1 family protein LpsE; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.787 |
page 1 of 4