STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1038Hypothetical protein; Identified by Glimmer2; putative. (456 aa)    
Predicted Functional Partners:
CC_1037
Hypothetical protein; Identified by Glimmer2; putative.
 
   
0.848
CC_2779
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.657
CC_1036
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.651
msrA2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity).
  
    0.572
CC_2027
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.545
CC_0224
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.515
CC_3273
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.509
CC_1722
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.505
CC_2734
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.487
CC_3326
Peptidoglycan binding domain protein; Identified by match to protein family HMM.
  
    0.466
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.