CC_1048 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CC_1048

Identified by match to PFAM protein family HMM PF00326. (642 aa)

Predicted Functional Partners:

CC_1047

0.582

CC_3688

0.515

infC

0.509

CC_2105

0.488

CC_3687

0.473

CC_1456

0.445

CC_0050

0.427

CC_0167

0.414

CC_0901

0.400

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0050	CC_1048	CC_0050	CC_1048	S-adenosylmethionine synthetase; Identified by match to protein family HMM; Belongs to the AdoMet synthase family.	Identified by match to PFAM protein family HMM PF00326.	0.427
CC_0167	CC_0901	CC_0167	CC_0901	Hypothetical protein; Identified by Glimmer2; putative.	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	0.400
CC_0167	CC_1048	CC_0167	CC_1048	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to PFAM protein family HMM PF00326.	0.414
CC_0901	CC_0167	CC_0901	CC_0167	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	Hypothetical protein; Identified by Glimmer2; putative.	0.400
CC_0901	CC_1048	CC_0901	CC_1048	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	Identified by match to PFAM protein family HMM PF00326.	0.400
CC_0901	CC_1456	CC_0901	CC_1456	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	Flagellin modification protein FlmH; Identified by match to protein family HMM.	0.404
CC_1047	CC_1048	CC_1047	CC_1048	Multidrug resistance protein, putative; Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00326.	0.582
CC_1048	CC_0050	CC_1048	CC_0050	Identified by match to PFAM protein family HMM PF00326.	S-adenosylmethionine synthetase; Identified by match to protein family HMM; Belongs to the AdoMet synthase family.	0.427
CC_1048	CC_0167	CC_1048	CC_0167	Identified by match to PFAM protein family HMM PF00326.	Hypothetical protein; Identified by Glimmer2; putative.	0.414
CC_1048	CC_0901	CC_1048	CC_0901	Identified by match to PFAM protein family HMM PF00326.	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	0.400
CC_1048	CC_1047	CC_1048	CC_1047	Identified by match to PFAM protein family HMM PF00326.	Multidrug resistance protein, putative; Identified by match to protein family HMM.	0.582
CC_1048	CC_1456	CC_1048	CC_1456	Identified by match to PFAM protein family HMM PF00326.	Flagellin modification protein FlmH; Identified by match to protein family HMM.	0.445
CC_1048	CC_2105	CC_1048	CC_2105	Identified by match to PFAM protein family HMM PF00326.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.488
CC_1048	CC_3687	CC_1048	CC_3687	Identified by match to PFAM protein family HMM PF00326.	Identified by match to PFAM protein family HMM PF00326.	0.473
CC_1048	CC_3688	CC_1048	CC_3688	Identified by match to PFAM protein family HMM PF00326.	Identified by match to PFAM protein family HMM PF00326.	0.515
CC_1048	infC	CC_1048	CC_1049	Identified by match to PFAM protein family HMM PF00326.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.509
CC_1456	CC_0901	CC_1456	CC_0901	Flagellin modification protein FlmH; Identified by match to protein family HMM.	Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.	0.404
CC_1456	CC_1048	CC_1456	CC_1048	Flagellin modification protein FlmH; Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00326.	0.445
CC_2105	CC_1048	CC_2105	CC_1048	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to PFAM protein family HMM PF00326.	0.488
CC_3687	CC_1048	CC_3687	CC_1048	Identified by match to PFAM protein family HMM PF00326.	Identified by match to PFAM protein family HMM PF00326.	0.473