CC_1062 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

CC_1062

Sensor histidine kinase; Identified by match to protein family HMM. (263 aa)

Predicted Functional Partners:

CC_2463

0.963

pleD

0.917

cenK

0.894

cenR

0.878

CC_0588

0.843

CC_0294

0.842

CC_0596

0.828

CC_3471

0.802

CC_3162

0.792

CC_2931

0.790

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0294	CC_1062	CC_0294	CC_1062	Phosphate regulon response regulator PhoB; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.842
CC_0294	CC_3162	CC_0294	CC_3162	Phosphate regulon response regulator PhoB; Identified by match to protein family HMM.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	0.583
CC_0294	cenK	CC_0294	CC_0530	Phosphate regulon response regulator PhoB; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.674
CC_0588	CC_1062	CC_0588	CC_1062	Chemotaxis protein CheYI; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.843
CC_0588	CC_3162	CC_0588	CC_3162	Chemotaxis protein CheYI; Identified by match to protein family HMM.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	0.759
CC_0588	cenK	CC_0588	CC_0530	Chemotaxis protein CheYI; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.711
CC_0596	CC_1062	CC_0596	CC_1062	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.828
CC_0596	CC_2463	CC_0596	CC_2463	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	Polar differentiation response regulator; Identified by match to protein family HMM.	0.779
CC_0596	CC_3162	CC_0596	CC_3162	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	0.504
CC_0596	cenK	CC_0596	CC_0530	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.670
CC_0596	cenR	CC_0596	CC_3743	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	DNA-binding response regulator; Identified by match to protein family HMM.	0.708
CC_1062	CC_0294	CC_1062	CC_0294	Sensor histidine kinase; Identified by match to protein family HMM.	Phosphate regulon response regulator PhoB; Identified by match to protein family HMM.	0.842
CC_1062	CC_0588	CC_1062	CC_0588	Sensor histidine kinase; Identified by match to protein family HMM.	Chemotaxis protein CheYI; Identified by match to protein family HMM.	0.843
CC_1062	CC_0596	CC_1062	CC_0596	Sensor histidine kinase; Identified by match to protein family HMM.	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	0.828
CC_1062	CC_2463	CC_1062	CC_2463	Sensor histidine kinase; Identified by match to protein family HMM.	Polar differentiation response regulator; Identified by match to protein family HMM.	0.963
CC_1062	CC_2931	CC_1062	CC_2931	Sensor histidine kinase; Identified by match to protein family HMM.	petR protein, putative; Identified by match to protein family HMM.	0.790
CC_1062	CC_3162	CC_1062	CC_3162	Sensor histidine kinase; Identified by match to protein family HMM.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM.	0.792
CC_1062	CC_3471	CC_1062	CC_3471	Sensor histidine kinase; Identified by match to protein family HMM.	Chemotaxis protein CheYIV; Identified by match to protein family HMM.	0.802
CC_1062	cenK	CC_1062	CC_0530	Sensor histidine kinase; Identified by match to protein family HMM.	Sensor histidine kinase; Identified by match to protein family HMM.	0.894
CC_1062	cenR	CC_1062	CC_3743	Sensor histidine kinase; Identified by match to protein family HMM.	DNA-binding response regulator; Identified by match to protein family HMM.	0.878