STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1065Hypothetical protein; Identified by Glimmer2; putative. (109 aa)    
Predicted Functional Partners:
CC_1064
Hypothetical protein; Identified by Glimmer2; putative.
       0.628
CC_0075
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.619
CC_3664
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.583
recO
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
 
     0.579
CC_2245
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.557
CC_2167
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.526
CC_1066
Hypothetical protein; Identified by Glimmer2; putative.
       0.494
cenK
Sensor histidine kinase; Identified by match to protein family HMM.
 
     0.489
CC_1451
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.478
CC_1453
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.466
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.