STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1079Hypothetical protein; Identified by Glimmer2; putative. (176 aa)    
Predicted Functional Partners:
CC_1080
Transcriptional regulator, LuxR family; Identified by match to protein family HMM.
 
     0.841
CC_3036
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.555
CC_2536
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.552
CC_0637
Transcriptional regulator, AraC family; Identified by match to protein family HMM.
  
     0.508
CC_0714
Membrane protein, putative; Similar to SP:P25747 GB:X62529 PID:405874 GB:U00096 PID:1788475; identified by sequence similarity; putative.
  
     0.498
CC_2488
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.498
CC_0891
Transcriptional regulator, AraC family; Identified by match to protein family HMM.
  
     0.497
CC_2139
Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM.
  
     0.497
CC_2538
Membrane protein, putative; Similar to GP:4007687; identified by sequence similarity; putative.
  
     0.489
CC_1672
Transcriptional regulator, AraC family; Identified by match to protein family HMM.
  
     0.485
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.