CC_1167 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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Textmining

[Homology]

Score

CC_1167

Hypothetical protein; Identified by Glimmer2; putative. (375 aa)

Predicted Functional Partners:

CC_1166

0.955

CC_1165

0.916

CC_1152

0.865

CC_1163

0.851

CC_1164

0.809

CC_1153

0.784

CC_1168

0.773

CC_1160

0.772

CC_1159

0.769

CC_1156

0.718

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_1152	CC_1153	Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.724
CC_1152	CC_1156	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.636
CC_1152	CC_1159	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.796
CC_1152	CC_1160	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.764
CC_1152	CC_1163	Identified by match to protein family HMM.	Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550.	0.675
CC_1152	CC_1164	Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.494
CC_1152	CC_1165	Identified by match to protein family HMM.	acyl-CoA synthetase; Identified by match to protein family HMM.	0.710
CC_1152	CC_1166	Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.678
CC_1152	CC_1167	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.865
CC_1153	CC_1152	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.724
CC_1153	CC_1156	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.947
CC_1153	CC_1159	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.862
CC_1153	CC_1160	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.872
CC_1153	CC_1163	Conserved hypothetical protein; Identified by Glimmer2; putative.	Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550.	0.774
CC_1153	CC_1164	Conserved hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.450
CC_1153	CC_1165	Conserved hypothetical protein; Identified by Glimmer2; putative.	acyl-CoA synthetase; Identified by match to protein family HMM.	0.758
CC_1153	CC_1166	Conserved hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.796
CC_1153	CC_1167	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.784
CC_1156	CC_1152	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.636
CC_1156	CC_1153	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.947