Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0815 | CC_1192 | TonB-dependent receptor, putative; Similar to GP:2281664; identified by sequence similarity; putative. | Iron compound ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.595 |
| CC_0815 | CC_1193 | TonB-dependent receptor, putative; Similar to GP:2281664; identified by sequence similarity; putative. | Iron compound ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.558 |
| CC_0815 | CC_2709 | TonB-dependent receptor, putative; Similar to GP:2281664; identified by sequence similarity; putative. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.640 |
| CC_0999 | CC_1191 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | 0.522 |
| CC_0999 | CC_1192 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | Iron compound ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.462 |
| CC_0999 | CC_1193 | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | Iron compound ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.550 |
| CC_1189 | CC_1190 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | 0.468 |
| CC_1189 | CC_1191 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | 0.449 |
| CC_1189 | CC_1192 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Iron compound ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.452 |
| CC_1189 | CC_1193 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Iron compound ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.469 |
| CC_1190 | CC_1189 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.468 |
| CC_1190 | CC_1191 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | 0.774 |
| CC_1190 | CC_1192 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Iron compound ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.774 |
| CC_1190 | CC_1193 | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | Iron compound ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.777 |
| CC_1191 | CC_0999 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | TonB-dependent receptor, putative; Similar to GP:9187833; identified by sequence similarity; putative. | 0.522 |
| CC_1191 | CC_1189 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.449 |
| CC_1191 | CC_1190 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | Transcriptional regulator, TetR family; Identified by match to protein family HMM. | 0.774 |
| CC_1191 | CC_1192 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | Iron compound ABC transporter, permease protein; Identified by match to PFAM protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
| CC_1191 | CC_1193 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | Iron compound ABC transporter, ATP-binding protein; Identified by match to protein family HMM. | 0.999 |
| CC_1191 | CC_1750 | Iron compound ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM. | TonB-dependent receptor; Identified by match to protein family HMM. | 0.730 |
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