STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1224Gluconolactonase; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative. (347 aa)    
Predicted Functional Partners:
CC_1225
Glucose-fructose oxidoreductase; Identified by match to protein family HMM.
 
 
 0.986
CC_1226
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.971
CC_2128
Gluconolactonase, putative; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
  
  
 
0.927
CC_1223
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.804
CC_0821
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM.
  
  
 0.766
CC_1633
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.697
CC_1418
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 0.664
CC_2023
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.664
CC_1222
Hypothetical protein; Identified by Glimmer2; putative.
       0.542
CC_1805
Smp-30/Cgr1 family protein; Similar to GB:AL009126; identified by sequence similarity; putative.
  
     0.435
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.