STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1226Hypothetical protein; Identified by Glimmer2; putative. (278 aa)    
Predicted Functional Partners:
CC_1224
Gluconolactonase; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
 
  
 0.971
CC_1225
Glucose-fructose oxidoreductase; Identified by match to protein family HMM.
 
  
 0.962
CC_0821
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM.
      
 0.759
CC_0798
Sialic acid-specific 9-O-acetylesterase, putative; Similar to GB:U40408 PID:1373055 PID:1628565 PID:1668766; identified by sequence similarity; putative.
 
   
 0.745
CC_2023
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.720
CC_0978
alpha-L-rhamnosidase, putative; Similar to GP:5763989; identified by sequence similarity; putative.
 
 
 0.700
CC_1633
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.688
CC_0795
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.678
CC_1946
NADH dehydrogenase I, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
    
 
 0.651
CC_1628
Membrane protein, putative; Identified by match to protein family HMM.
 
    0.644
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.