STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1243cbbBc protein; Identified by match to protein family HMM; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (762 aa)    
Predicted Functional Partners:
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
 0.978
CC_1404
Cytochrome c oxidase, CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.879
tufA
Translation elongation factor EF-Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.855
CC_3607
Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645.
  
 
 0.826
CC_0472
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.813
CC_3199
Translation elongation factor EF-Tu; Identified by match to TIGR protein family HMM TIGR00485.
   
 
 0.788
CC_1244
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_1402
Cytochrome c oxidase, CcoO subunit; Identified by match to TIGR protein family HMM TIGR00781.
  
  
 0.760
CC_1210
Identified by match to protein family HMM.
  
 
 0.752
CC_1632
Identified by match to protein family HMM.
  
 
 0.752
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.