CC_1278 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

CC_1278

Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732. (540 aa)

Predicted Functional Partners:

CC_1639

0.648

CC_2058

0.643

CC_1280

0.578

CC_1279

0.574

CC_1277

0.572

CC_1281

0.570

CC_0323

0.526

CC_1413

0.526

CC_1485

0.526

CC_1352

0.525

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0323	CC_1278	Conserved hypothetical protein; Identified by Glimmer2; putative.	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	0.526
CC_0323	CC_1485	Conserved hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.473
CC_0323	CC_1639	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.677
CC_0323	CC_2058	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.845
CC_1277	CC_1278	Identified by match to PFAM protein family HMM PF01663.	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	0.572
CC_1277	CC_1279	Identified by match to PFAM protein family HMM PF01663.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.433
CC_1277	CC_1280	Identified by match to PFAM protein family HMM PF01663.	Transcriptional regulator, ArsR family; Identified by match to protein family HMM.	0.433
CC_1277	CC_1281	Identified by match to PFAM protein family HMM PF01663.	Tetracycline resistance protein; Identified by match to protein family HMM.	0.436
CC_1278	CC_0323	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.526
CC_1278	CC_1277	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Identified by match to PFAM protein family HMM PF01663.	0.572
CC_1278	CC_1279	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.574
CC_1278	CC_1280	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Transcriptional regulator, ArsR family; Identified by match to protein family HMM.	0.578
CC_1278	CC_1281	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Tetracycline resistance protein; Identified by match to protein family HMM.	0.570
CC_1278	CC_1352	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Identified by match to PFAM protein family HMM PF00378.	0.525
CC_1278	CC_1413	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Hypothetical protein; Identified by Glimmer2; putative.	0.526
CC_1278	CC_1485	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.526
CC_1278	CC_1639	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Identified by match to protein family HMM.	0.648
CC_1278	CC_2058	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	Hypothetical protein; Identified by Glimmer2; putative.	0.643
CC_1279	CC_1277	Conserved hypothetical protein; Identified by Glimmer2; putative.	Identified by match to PFAM protein family HMM PF01663.	0.433
CC_1279	CC_1278	Conserved hypothetical protein; Identified by Glimmer2; putative.	Oxidoreductase, GMC family; Identified by match to PFAM protein family HMM PF00732.	0.574