Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0709 | CC_1283 | CC_0709 | CC_1283 | Ada regulatory protein, internal deletion; Identified by match to PFAM protein family HMM PF01035. | ATPase, AAA family; Identified by match to protein family HMM. | 0.630 |
| CC_0709 | CC_2038 | CC_0709 | CC_2038 | Ada regulatory protein, internal deletion; Identified by match to PFAM protein family HMM PF01035. | Hypothetical protein; Identified by Glimmer2; putative. | 0.567 |
| CC_0709 | CC_3729 | CC_0709 | CC_3729 | Ada regulatory protein, internal deletion; Identified by match to PFAM protein family HMM PF01035. | Ada regulatory protein; Identified by match to PFAM protein family HMM PF01035. | 0.434 |
| CC_1283 | CC_0709 | CC_1283 | CC_0709 | ATPase, AAA family; Identified by match to protein family HMM. | Ada regulatory protein, internal deletion; Identified by match to PFAM protein family HMM PF01035. | 0.630 |
| CC_1283 | CC_1284 | CC_1283 | CC_1284 | ATPase, AAA family; Identified by match to protein family HMM. | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | 0.816 |
| CC_1283 | CC_1285 | CC_1283 | CC_1285 | ATPase, AAA family; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.774 |
| CC_1283 | CC_1286 | CC_1283 | CC_1286 | ATPase, AAA family; Identified by match to protein family HMM. | Gluconate 5-dehydrogenase; Identified by match to protein family HMM. | 0.556 |
| CC_1283 | CC_2038 | CC_1283 | CC_2038 | ATPase, AAA family; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.639 |
| CC_1283 | CC_3465 | CC_1283 | CC_3465 | ATPase, AAA family; Identified by match to protein family HMM. | ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM. | 0.721 |
| CC_1283 | CC_3729 | CC_1283 | CC_3729 | ATPase, AAA family; Identified by match to protein family HMM. | Ada regulatory protein; Identified by match to PFAM protein family HMM PF01035. | 0.604 |
| CC_1283 | ftsK | CC_1283 | CC_3704 | ATPase, AAA family; Identified by match to protein family HMM. | Cell division protein FtsK, putative; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the directi [...] | 0.640 |
| CC_1283 | nadE | CC_1283 | CC_3619 | ATPase, AAA family; Identified by match to protein family HMM. | NAD(+) synthetase, putative; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.537 |
| CC_1283 | polA | CC_1283 | CC_3464 | ATPase, AAA family; Identified by match to protein family HMM. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.578 |
| CC_1284 | CC_1283 | CC_1284 | CC_1283 | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | ATPase, AAA family; Identified by match to protein family HMM. | 0.816 |
| CC_1284 | CC_1285 | CC_1284 | CC_1285 | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| CC_1284 | CC_1286 | CC_1284 | CC_1286 | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | Gluconate 5-dehydrogenase; Identified by match to protein family HMM. | 0.471 |
| CC_1284 | polA | CC_1284 | CC_3464 | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.477 |
| CC_1285 | CC_1283 | CC_1285 | CC_1283 | Hypothetical protein; Identified by Glimmer2; putative. | ATPase, AAA family; Identified by match to protein family HMM. | 0.774 |
| CC_1285 | CC_1284 | CC_1285 | CC_1284 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal large subunit pseudouridine synthase D; Identified by match to protein family HMM. | 0.773 |
| CC_1285 | CC_1286 | CC_1285 | CC_1286 | Hypothetical protein; Identified by Glimmer2; putative. | Gluconate 5-dehydrogenase; Identified by match to protein family HMM. | 0.468 |
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