CC_1326 protein (Caulobacter vibrioides CB15)

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CC_1326

RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (415 aa)

Predicted Functional Partners:

CC_1327

0.773

truB

0.711

CC_1328

0.618

truA

0.616

trmB

0.596

guaA

0.568

CC_1325

0.567

CC_1187

0.559

rnr

0.548

CC_0102

0.518

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0102	CC_1326	CC_0102	CC_1326	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.518
CC_0102	guaA	CC_0102	CC_1620	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.413
CC_0102	rnr	CC_0102	CC_2453	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Exoribonuclease, VacB and RNase II family; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.492
CC_0102	trmB	CC_0102	CC_0049	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.588
CC_0102	truB	CC_0102	CC_0036	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.486
CC_1187	CC_1326	CC_1187	CC_1326	spoU rRNA methylase family protein; Identified by match to protein family HMM; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.559
CC_1187	rnr	CC_1187	CC_2453	spoU rRNA methylase family protein; Identified by match to protein family HMM; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Exoribonuclease, VacB and RNase II family; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.526
CC_1325	CC_1326	CC_1325	CC_1326	Hypothetical protein; Identified by Glimmer2; putative.	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.567
CC_1325	CC_1327	CC_1325	CC_1327	Hypothetical protein; Identified by Glimmer2; putative.	Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209.	0.576
CC_1325	CC_1328	CC_1325	CC_1328	Hypothetical protein; Identified by Glimmer2; putative.	Acyltransferase, putative; Identified by match to protein family HMM.	0.456
CC_1326	CC_0102	CC_1326	CC_0102	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	rRNA methyltransferase RsmB; Identified by match to TIGR protein family HMM TIGR00563; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.518
CC_1326	CC_1187	CC_1326	CC_1187	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	spoU rRNA methylase family protein; Identified by match to protein family HMM; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.559
CC_1326	CC_1325	CC_1326	CC_1325	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Hypothetical protein; Identified by Glimmer2; putative.	0.567
CC_1326	CC_1327	CC_1326	CC_1327	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209.	0.773
CC_1326	CC_1328	CC_1326	CC_1328	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Acyltransferase, putative; Identified by match to protein family HMM.	0.618
CC_1326	guaA	CC_1326	CC_1620	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.568
CC_1326	rnr	CC_1326	CC_2453	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Exoribonuclease, VacB and RNase II family; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.	0.548
CC_1326	trmB	CC_1326	CC_0049	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.596
CC_1326	truA	CC_1326	CC_0278	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	tRNA pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.616
CC_1326	truB	CC_1326	CC_0036	RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.711

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