Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CC_0390 | CC_1279 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.489 |
| CC_0390 | CC_1329 | Conserved hypothetical protein; Identified by Glimmer2; putative. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | 0.788 |
| CC_1279 | CC_0390 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.489 |
| CC_1279 | CC_1329 | Conserved hypothetical protein; Identified by Glimmer2; putative. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | 0.543 |
| CC_1279 | CC_3077 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.488 |
| CC_1326 | CC_1327 | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | 0.777 |
| CC_1326 | CC_1328 | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Acyltransferase, putative; Identified by match to protein family HMM. | 0.618 |
| CC_1326 | CC_1329 | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | 0.457 |
| CC_1327 | CC_1326 | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.777 |
| CC_1327 | CC_1328 | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | Acyltransferase, putative; Identified by match to protein family HMM. | 0.618 |
| CC_1327 | CC_1329 | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | 0.457 |
| CC_1328 | CC_1326 | Acyltransferase, putative; Identified by match to protein family HMM. | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.618 |
| CC_1328 | CC_1327 | Acyltransferase, putative; Identified by match to protein family HMM. | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | 0.618 |
| CC_1328 | CC_1329 | Acyltransferase, putative; Identified by match to protein family HMM. | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | 0.562 |
| CC_1328 | CC_1330 | Acyltransferase, putative; Identified by match to protein family HMM. | Identified by match to PFAM protein family HMM PF01444. | 0.433 |
| CC_1329 | CC_0390 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.788 |
| CC_1329 | CC_1279 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.543 |
| CC_1329 | CC_1326 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | RNA methyltransferase, TrmA family; Identified by match to protein family HMM; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.457 |
| CC_1329 | CC_1327 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | Ubiquinone/menaquinone biosynthesis methlytransferase family protein; Identified by match to PFAM protein family HMM PF01209. | 0.457 |
| CC_1329 | CC_1328 | RNA polymerase sigma-70 factor, ECF subfamily; Identified by match to protein family HMM; Belongs to the sigma-70 factor family. | Acyltransferase, putative; Identified by match to protein family HMM. | 0.562 |
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