CC_1367 protein (Caulobacter vibrioides CB15)

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second shell of interactors

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Score

CC_1367

Hypothetical protein; Identified by Glimmer2; putative. (179 aa)

Predicted Functional Partners:

rpmF

0.974

rplK

0.962

rpsC

0.946

rplA

0.909

rpsF

0.904

rpsB

0.903

rpsP

0.902

infC

0.901

rplU

0.899

rplM

0.898

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_1367	infC	CC_1367	CC_1049	Hypothetical protein; Identified by Glimmer2; putative.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.901
CC_1367	rplA	CC_1367	CC_0640	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.909
CC_1367	rplK	CC_1367	CC_0641	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.962
CC_1367	rplM	CC_1367	CC_1376	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.898
CC_1367	rplU	CC_1367	CC_0319	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.899
CC_1367	rpmF	CC_1367	CC_1721	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein L32; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL32 family.	0.974
CC_1367	rpsB	CC_1367	CC_1923	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein S2; Identified by match to protein family HMM; Belongs to the universal ribosomal protein uS2 family.	0.903
CC_1367	rpsC	CC_1367	CC_1254	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.946
CC_1367	rpsF	CC_1367	CC_1669	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.904
CC_1367	rpsP	CC_1367	CC_3652	Hypothetical protein; Identified by Glimmer2; putative.	Ribosomal protein S16; Identified by match to TIGR protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.902
infC	CC_1367	CC_1049	CC_1367	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Hypothetical protein; Identified by Glimmer2; putative.	0.901
infC	rplA	CC_1049	CC_0640	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.973
infC	rplK	CC_1049	CC_0641	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.982
infC	rplM	CC_1049	CC_1376	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
infC	rplU	CC_1049	CC_0319	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.982
infC	rpmF	CC_1049	CC_1721	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L32; Identified by match to protein family HMM; Belongs to the bacterial ribosomal protein bL32 family.	0.926
infC	rpsB	CC_1049	CC_1923	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein S2; Identified by match to protein family HMM; Belongs to the universal ribosomal protein uS2 family.	0.984
infC	rpsC	CC_1049	CC_1254	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.985
infC	rpsF	CC_1049	CC_1669	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.982
infC	rpsP	CC_1049	CC_3652	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein S16; Identified by match to TIGR protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.965