STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1375Conserved hypothetical protein; Identified by Glimmer2; putative. (466 aa)    
Predicted Functional Partners:
CC_1565
Alkaline phosphatase D; Similar to SP:P42251 PID:710013 PID:1680684 GB:AL009126; identified by sequence similarity; putative.
 
  
 0.703
CC_0455
Alkaline phosphatase, putative; Similar to GP:5596813; identified by sequence similarity; putative.
 
  
 0.622
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.468
rpsI
Ribosomal protein S9; Identified by match to protein family HMM; Belongs to the universal ribosomal protein uS9 family.
       0.468
CC_2090
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.464
CC_0362
Phosphonates ABC transporter, periplasmic phosphonates-binding protein; Similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949; identified by sequence similarity; putative.
   
  
 0.455
CC_0911
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.410
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.