STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1418Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (378 aa)    
Predicted Functional Partners:
CC_0092
UDP-glucose 4-epimerase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.921
CC_2383
UDP-glucose 4-epimerase; Identified by match to protein family HMM; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.921
CC_0967
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM.
  
 
 0.915
glk
Glucokinase; Identified by match to TIGR protein family HMM TIGR00749; Belongs to the bacterial glucokinase family.
    
 0.906
CC_3167
Identified by match to protein family HMM; Belongs to the bacterial glucokinase family.
    
 0.906
CC_3323
Conserved hypothetical protein; Identified by Glimmer2; putative.
     
  0.900
CC_1419
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.712
CC_1224
Gluconolactonase; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
   
 0.664
dnaE1
DNA polymerase III, alpha subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase (By similarity); Belongs to the DNA polymerase type-C family. DnaE subfamily.
   
  
 0.482
CC_0447
beta-N-acetylhexosaminidase, putative; Identified by match to PFAM protein family HMM PF00728.
  
  
 0.479
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.