Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0329 | CC_1439 | CC_0329 | CC_1439 | Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.866 |
| CC_0761 | CC_1439 | CC_0761 | CC_1439 | ABC transporter, ATP-binding protein CydD; Identified by match to protein family HMM. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.739 |
| CC_1008 | CC_1439 | CC_1008 | CC_1439 | RsaA secretion system, ATP-binding protein RsaD; Identified by match to protein family HMM. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.839 |
| CC_1438 | CC_1439 | CC_1438 | CC_1439 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.584 |
| CC_1438 | CC_1440 | CC_1438 | CC_1440 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | 0.584 |
| CC_1438 | CC_1441 | CC_1438 | CC_1441 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.584 |
| CC_1439 | CC_0329 | CC_1439 | CC_0329 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.866 |
| CC_1439 | CC_0761 | CC_1439 | CC_0761 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | ABC transporter, ATP-binding protein CydD; Identified by match to protein family HMM. | 0.739 |
| CC_1439 | CC_1008 | CC_1439 | CC_1008 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | RsaA secretion system, ATP-binding protein RsaD; Identified by match to protein family HMM. | 0.839 |
| CC_1439 | CC_1438 | CC_1439 | CC_1438 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.584 |
| CC_1439 | CC_1440 | CC_1439 | CC_1440 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | 0.999 |
| CC_1439 | CC_1441 | CC_1439 | CC_1441 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.998 |
| CC_1439 | CC_1596 | CC_1439 | CC_1596 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Sulphate ABC transporter, permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.762 |
| CC_1439 | CC_1597 | CC_1439 | CC_1597 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Sulfate ABC transporter, permease protein; Identified by match to protein family HMM. | 0.795 |
| CC_1439 | CC_3607 | CC_1439 | CC_3607 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.691 |
| CC_1439 | argG | CC_1439 | CC_0129 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Argininosuccinate synthase; Identified by match to TIGR protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.541 |
| CC_1440 | CC_1438 | CC_1440 | CC_1438 | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.584 |
| CC_1440 | CC_1439 | CC_1440 | CC_1439 | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.999 |
| CC_1440 | CC_1441 | CC_1440 | CC_1441 | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.999 |
| CC_1440 | CC_3607 | CC_1440 | CC_3607 | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645. | 0.581 |
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