Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0652 | CC_1441 | CC_0652 | CC_1441 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.466 |
| CC_0652 | CC_2670 | CC_0652 | CC_2670 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | 0.977 |
| CC_0652 | CC_2971 | CC_0652 | CC_2971 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM. | 0.978 |
| CC_1437 | CC_1438 | CC_1437 | CC_1438 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.639 |
| CC_1437 | CC_1439 | CC_1437 | CC_1439 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.519 |
| CC_1437 | CC_1440 | CC_1437 | CC_1440 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | 0.504 |
| CC_1437 | CC_1441 | CC_1437 | CC_1441 | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.502 |
| CC_1438 | CC_1437 | CC_1438 | CC_1437 | Hypothetical protein; Identified by Glimmer2; putative. | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | 0.639 |
| CC_1438 | CC_1439 | CC_1438 | CC_1439 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 0.584 |
| CC_1438 | CC_1440 | CC_1438 | CC_1440 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | 0.584 |
| CC_1438 | CC_1441 | CC_1438 | CC_1441 | Hypothetical protein; Identified by Glimmer2; putative. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.584 |
| CC_1438 | CC_1442 | CC_1438 | CC_1442 | Hypothetical protein; Identified by Glimmer2; putative. | 3-oxoacyl-(acyl-carrier-protein) synthase III, putative; Identified by match to protein family HMM. | 0.404 |
| CC_1439 | CC_1437 | CC_1439 | CC_1437 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | 0.519 |
| CC_1439 | CC_1438 | CC_1439 | CC_1438 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.584 |
| CC_1439 | CC_1440 | CC_1439 | CC_1440 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | 0.999 |
| CC_1439 | CC_1441 | CC_1439 | CC_1441 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Cystine ABC transporter, periplasmic cystine-binding protein; Identified by match to protein family HMM; Belongs to the bacterial solute-binding protein 3 family. | 0.998 |
| CC_1439 | CC_1442 | CC_1439 | CC_1442 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | 3-oxoacyl-(acyl-carrier-protein) synthase III, putative; Identified by match to protein family HMM. | 0.532 |
| CC_1439 | argG | CC_1439 | CC_0129 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Argininosuccinate synthase; Identified by match to TIGR protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.541 |
| CC_1439 | argH | CC_1439 | CC_2211 | Cystine ABC transporter, ATP-binding protein, putative; Identified by match to protein family HMM. | Argininosuccinate lyase; Identified by match to TIGR protein family HMM TIGR00838. | 0.443 |
| CC_1440 | CC_1437 | CC_1440 | CC_1437 | Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM. | ATP-dependent DNA helicase RecG; Identified by match to protein family HMM. | 0.504 |
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