STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1452Conserved hypothetical protein; Identified by Glimmer2; putative. (280 aa)    
Predicted Functional Partners:
CC_1453
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.749
CC_1451
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.599
CC_1450
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.591
hpf
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
  
 0.541
CC_0345
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.534
flbE
flbE protein; Similar to GB:M98855 SP:Q04953 PID:144249; identified by sequence similarity; putative.
  
     0.523
CC_3494
Identified by match to protein family HMM.
  
  
 0.520
CC_0920
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.511
CC_1409
Outer membrane protein OmpW; Similar to SP:P21364 GB:X13583 PID:43211 PID:902379 PID:902388; identified by sequence similarity; putative.
 
  
 0.497
CC_0898
Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
   
 0.488
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.