CC_1508 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

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Experiments

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[Homology]

Score

CC_1508

Major facilitator family transporter; Identified by match to protein family HMM. (431 aa)

Predicted Functional Partners:

CC_1509

0.720

CC_0572

0.649

CC_2180

0.573

CC_1507

0.511

CC_0614

0.449

CC_2474

0.435

CC_1510

0.428

CC_1488

0.418

CC_1496

0.400

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0572	CC_1496	Conserved hypothetical protein; Identified by Glimmer2; putative.	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	0.404
CC_0572	CC_1508	Conserved hypothetical protein; Identified by Glimmer2; putative.	Major facilitator family transporter; Identified by match to protein family HMM.	0.649
CC_0572	CC_2474	Conserved hypothetical protein; Identified by Glimmer2; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.418
CC_0614	CC_1508	Nitrate transporter, NarK/NasA family; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.449
CC_1488	CC_1496	Conserved hypothetical protein; Identified by Glimmer2; putative.	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	0.927
CC_1488	CC_1508	Conserved hypothetical protein; Identified by Glimmer2; putative.	Major facilitator family transporter; Identified by match to protein family HMM.	0.418
CC_1496	CC_0572	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.404
CC_1496	CC_1488	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.927
CC_1496	CC_1508	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	Major facilitator family transporter; Identified by match to protein family HMM.	0.400
CC_1507	CC_1508	Conserved hypothetical protein; Identified by Glimmer2; putative.	Major facilitator family transporter; Identified by match to protein family HMM.	0.511
CC_1507	CC_1509	Conserved hypothetical protein; Identified by Glimmer2; putative.	2-keto-4-pentenoate hydratase, putative; Identified by match to protein family HMM.	0.461
CC_1508	CC_0572	Major facilitator family transporter; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.649
CC_1508	CC_0614	Major facilitator family transporter; Identified by match to protein family HMM.	Nitrate transporter, NarK/NasA family; Identified by match to protein family HMM.	0.449
CC_1508	CC_1488	Major facilitator family transporter; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.418
CC_1508	CC_1496	Major facilitator family transporter; Identified by match to protein family HMM.	Carbohydrate kinase, pfkB family; Identified by match to protein family HMM.	0.400
CC_1508	CC_1507	Major facilitator family transporter; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.511
CC_1508	CC_1509	Major facilitator family transporter; Identified by match to protein family HMM.	2-keto-4-pentenoate hydratase, putative; Identified by match to protein family HMM.	0.720
CC_1508	CC_1510	Major facilitator family transporter; Identified by match to protein family HMM.	Transcriptional regulator, BlaI family, putative; Similar to GB:M14734 SP:P06555 GB:M22352 GB:M22353 PID:143294; identified by sequence similarity; putative.	0.428
CC_1508	CC_2180	Major facilitator family transporter; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.573
CC_1508	CC_2474	Major facilitator family transporter; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.435