STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1537Identified by match to protein family HMM. (220 aa)    
Predicted Functional Partners:
CC_1536
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.775
parB
Chromosome partitioning protein ParB; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication; Belongs to the ParB family.
  
 
 0.725
CC_0765
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.569
CC_1538
Membrane protein, putative; Identified by match to protein family HMM.
       0.480
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.451
CC_3621
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.445
CC_2687
Conjugal transfer protein TrbF; Identified by match to protein family HMM.
 
    0.412
CC_2075
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 
 0.409
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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