STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1546Penicillin-binding protein 2; Identified by match to protein family HMM. (672 aa)    
Predicted Functional Partners:
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.999
CC_1544
Rod shape-determining protein MreC; Identified by match to protein family HMM.
 
 
 0.979
CC_1543
Rod shape-determining protein MreB; Similar to SP:P13519 GB:M22055 PID:606191 PID:1128967 GB:U00096; identified by sequence similarity; putative.
 
 0.960
CC_2560
Identified by match to protein family HMM.
 
  
0.939
CC_2552
Cell division protein DivB; Identified by match to protein family HMM; Belongs to the SEDS family.
 
 0.903
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.845
CC_1545
Hypothetical protein; Identified by Glimmer2; putative.
       0.781
CC_1548
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.778
CC_1875
Penicillin-binding protein, 1A family; Identified by match to protein family HMM.
 
 
 
 0.768
CC_3235
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.742
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.