STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1565Alkaline phosphatase D; Similar to SP:P42251 PID:710013 PID:1680684 GB:AL009126; identified by sequence similarity; putative. (528 aa)    
Predicted Functional Partners:
CC_0455
Alkaline phosphatase, putative; Similar to GP:5596813; identified by sequence similarity; putative.
  
 
 
0.926
folE
GTP cyclohydrolase I; Identified by match to TIGR protein family HMM TIGR00063.
    
 0.918
CC_0416
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.914
CC_3158
6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to PFAM protein family HMM PF01242.
     
  0.900
CC_1375
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.703
CC_1563
N-hydroxyarylamine O-acetyltransferase; Identified by match to PFAM protein family HMM PF00797; Belongs to the arylamine N-acetyltransferase family.
       0.605
recO
Conserved hypothetical protein; Involved in DNA repair and RecF pathway recombination.
       0.605
parC
Topoisomerase IV, subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
       0.588
CC_1567
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.588
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.571
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.