STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1573Chemotaxis MotB protein; Identified by match to protein family HMM. (298 aa)    
Predicted Functional Partners:
CC_0750
Chemotaxis MotA protein; Identified by match to protein family HMM.
 0.999
CC_0899
Flagellar hook-associated protein FlaN, putative; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.941
FlgB
Flagellar basal-body rod protein FlgB, putative; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.931
FlgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
  
 0.928
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction.
 
  
 0.927
CC_0901
Flagellar hook assembly protein FlgD, putative; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.925
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.910
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.887
CC_0433
Chemotaxis protein CheA; Identified by match to protein family HMM.
 
  
 0.867
flgG
Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
 
 0.865
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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