CC_1632 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

CC_1632

Identified by match to protein family HMM. (110 aa)

Predicted Functional Partners:

CC_0472

0.960

CC_0474

0.956

CC_0473

0.951

CC_2935

0.922

CC_1210

0.915

CC_1631

0.891

CC_1630

0.886

CC_1628

0.804

coq7

0.798

CC_1736

0.760

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0472	CC_0473	CC_0472	CC_0473	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CC_0472	CC_0474	CC_0472	CC_0474	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	0.999
CC_0472	CC_1210	CC_0472	CC_1210	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Identified by match to protein family HMM.	0.967
CC_0472	CC_1632	CC_0472	CC_1632	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Identified by match to protein family HMM.	0.960
CC_0472	CC_2935	CC_0472	CC_2935	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Cytochrome c, membrane-bound; Identified by match to protein family HMM.	0.970
CC_0472	coq7	CC_0472	CC_2197	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Coq7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.	0.404
CC_0473	CC_0472	CC_0473	CC_0472	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CC_0473	CC_0474	CC_0473	CC_0474	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	0.999
CC_0473	CC_1210	CC_0473	CC_1210	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Identified by match to protein family HMM.	0.960
CC_0473	CC_1632	CC_0473	CC_1632	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Identified by match to protein family HMM.	0.951
CC_0473	CC_1736	CC_0473	CC_1736	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.736
CC_0473	CC_2935	CC_0473	CC_2935	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Cytochrome c, membrane-bound; Identified by match to protein family HMM.	0.962
CC_0473	coq7	CC_0473	CC_2197	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Coq7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.	0.784
CC_0474	CC_0472	CC_0474	CC_0472	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CC_0474	CC_0473	CC_0474	CC_0473	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999
CC_0474	CC_1210	CC_0474	CC_1210	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	Identified by match to protein family HMM.	0.966
CC_0474	CC_1632	CC_0474	CC_1632	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	Identified by match to protein family HMM.	0.956
CC_0474	CC_2935	CC_0474	CC_2935	Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by match to PFAM protein family HMM PF02167.	Cytochrome c, membrane-bound; Identified by match to protein family HMM.	0.971
CC_1210	CC_0472	CC_1210	CC_0472	Identified by match to protein family HMM.	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.967
CC_1210	CC_0473	CC_1210	CC_0473	Identified by match to protein family HMM.	Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.960