STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1639Identified by match to protein family HMM. (491 aa)    
Predicted Functional Partners:
pssZ
PssZ; Identified by Glimmer2; putative.
   
 0.988
CC_2058
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.975
CC_1640
Transcriptional regulator, BlaI family; Similar to GB:M14734 SP:P06555 GB:M22352 GB:M22353 PID:143294; identified by sequence similarity; putative.
 
  
 0.961
CC_1185
Helicase, putative; Identified by match to protein family HMM.
    
 0.915
CC_0473
Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.872
CC_2752
EF hand domain protein; Identified by match to protein family HMM.
   
 0.856
CC_2226
EF hand domain protein; Identified by match to protein family HMM.
    
 0.854
CC_3507
Transcriptional regulator, BlaI family, putative; Similar to GB:M14734 SP:P06555 GB:M22352 GB:M22353 PID:143294; identified by sequence similarity; putative.
 
  
 0.845
CC_1510
Transcriptional regulator, BlaI family, putative; Similar to GB:M14734 SP:P06555 GB:M22352 GB:M22353 PID:143294; identified by sequence similarity; putative.
 
  
 0.834
CC_1223
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
 0.817
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.