Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_1035 | CC_1652 | CC_1035 | CC_1652 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.745 |
CC_1035 | CC_2637 | CC_1035 | CC_2637 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.552 |
CC_1035 | CC_3010 | CC_1035 | CC_3010 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.506 |
CC_1035 | CC_3115 | CC_1035 | CC_3115 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
CC_1367 | CC_1652 | CC_1367 | CC_1652 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.746 |
CC_1367 | CC_1659 | CC_1367 | CC_1659 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
CC_1367 | HolA | CC_1367 | CC_3751 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.596 |
CC_1652 | CC_1035 | CC_1652 | CC_1035 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.745 |
CC_1652 | CC_1367 | CC_1652 | CC_1367 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.746 |
CC_1652 | CC_1653 | CC_1652 | CC_1653 | Hypothetical protein; Identified by Glimmer2; putative. | PQQ enzyme repeat family protein; Identified by match to protein family HMM. | 0.818 |
CC_1652 | CC_1659 | CC_1652 | CC_1659 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.702 |
CC_1652 | CC_1725 | CC_1652 | CC_1725 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.702 |
CC_1652 | CC_2323 | CC_1652 | CC_2323 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.718 |
CC_1652 | CC_2637 | CC_1652 | CC_2637 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.716 |
CC_1652 | CC_3010 | CC_1652 | CC_3010 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM. | 0.720 |
CC_1652 | CC_3115 | CC_1652 | CC_3115 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.711 |
CC_1652 | HolA | CC_1652 | CC_3751 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.706 |
CC_1653 | CC_1652 | CC_1653 | CC_1652 | PQQ enzyme repeat family protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.818 |
CC_1653 | HolA | CC_1653 | CC_3751 | PQQ enzyme repeat family protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.467 |
CC_1659 | CC_1367 | CC_1659 | CC_1367 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.575 |
page 1 of 4