STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1663Conserved hypothetical protein; Identified by Glimmer2; putative. (161 aa)    
Predicted Functional Partners:
CC_2103
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.650
CC_1662
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.601
CC_1664
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
       0.556
CC_0210
TonB-dependent receptor; Identified by match to protein family HMM.
  
    0.547
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.527
CC_1431
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.509
CC_1542
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
     0.507
CC_0937
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.488
CC_3194
TonB-dependent receptor; Similar to GP:9105165; identified by sequence similarity; putative.
  
    0.479
CC_2565
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.475
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.