CC_1723 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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Experiments

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[Homology]

Score

CC_1723

Identified by match to PFAM protein family HMM PF00378. (256 aa)

Predicted Functional Partners:

CC_0715

0.997

CC_1967

0.961

CC_1798

0.944

CC_2172

0.944

CC_0427

0.943

CC_0704

0.933

CC_3498

0.933

CC_3189

0.932

CC_0076

0.928

CC_1851

0.925

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0076	CC_0427	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	0.973
CC_0076	CC_0704	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to protein family HMM.	0.952
CC_0076	CC_0715	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	3-hydroxybutyryl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00725.	0.932
CC_0076	CC_1723	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.928
CC_0076	CC_1798	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441.	0.973
CC_0076	CC_1851	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.791
CC_0076	CC_1967	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.995
CC_0076	CC_2172	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	isovaleryl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441.	0.973
CC_0076	CC_3189	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.956
CC_0076	CC_3498	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to protein family HMM.	0.952
CC_0427	CC_0076	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.973
CC_0427	CC_0715	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	3-hydroxybutyryl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00725.	0.554
CC_0427	CC_1723	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00378.	0.943
CC_0427	CC_1798	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	acyl-CoA dehydrogenase; Identified by match to PFAM protein family HMM PF00441.	0.900
CC_0427	CC_1851	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	Identified by match to PFAM protein family HMM PF00378.	0.719
CC_0427	CC_3189	acyl-CoA dehydrogenase, putative; Identified by match to PFAM protein family HMM PF00441.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.744
CC_0704	CC_0076	Identified by match to protein family HMM.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.952
CC_0704	CC_1723	Identified by match to protein family HMM.	Identified by match to PFAM protein family HMM PF00378.	0.933
CC_0704	CC_1967	Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.400
CC_0704	CC_3189	Identified by match to protein family HMM.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.544