STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1829Urea amidolyase-related protein; Identified by match to PFAM protein family HMM PF00289. (1207 aa)    
Predicted Functional Partners:
CC_1830
Identified by match to PFAM protein family HMM PF01425.
  
 0.999
CC_1811
Transcriptional regulator, putative; Identified by match to protein family HMM.
  
    0.997
CC_1727
Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.989
CC_3214
Carbamoyl-phosphate synthase/carboxyl transferase; Identified by match to PFAM protein family HMM PF00289.
 
0.983
CC_1828
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 0.970
CC_1827
Conserved hypothetical protein; Identified by Glimmer2; putative.
   
 0.968
CC_2613
Pyrazinamidase/nicotinamidase; Identified by match to PFAM protein family HMM PF01425.
    
 0.943
CC_1883
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.916
CC_1975
propionyl-CoA carboxylase, beta subunit; Identified by match to protein family HMM.
 
 0.906
CC_2170
propionyl-CoA carboxylase, beta subunit, putative; Identified by match to protein family HMM.
 
 0.892
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.