STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1839Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the sulfur carrier protein TusA family. (77 aa)    
Predicted Functional Partners:
CC_1865
Aminotransferase, class V; Identified by match to protein family HMM.
  
 
 0.945
CC_1838
Ribosomal small subunit pseudouridine synthase A; Identified by match to protein family HMM; Belongs to the pseudouridine synthase RsuA family.
       0.783
CC_1837
Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the methyltransferase superfamily.
       0.752
cysC
Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.672
CC_1836
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.519
CC_2090
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.476
CC_0017
Molybdopterin converting factor, subunit 1; Similar to SP:P30748 PID:42011 GB:U00096 PID:1651357 PID:1787002; identified by sequence similarity; putative.
  
 
 0.434
CC_2058
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.428
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.