STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1856Identified by match to PFAM protein family HMM PF01553. (272 aa)    
Predicted Functional Partners:
plsY
Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.922
CC_2219
1-acyl-sn-glycerol-3-phosphate acyltransferase; Identified by match to PFAM protein family HMM PF01553.
  
  
 
0.919
CC_1918
Phosphatidate cytidylyltransferase; Identified by match to PFAM protein family HMM PF01148; Belongs to the CDS family.
    
 0.915
CC_1855
Transcriptional regulator, TetR family; Identified by match to protein family HMM.
 
    0.838
gpsA
Glycerol-3-phosphate dehydrogenase (NAD+); Identified by match to PFAM protein family HMM PF01210; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.826
CC_1854
Identified by match to PFAM protein family HMM PF01075.
     
 0.556
CC_1853
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.555
CC_1024
Identified by match to protein family HMM.
  
    0.478
CC_0528
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.422
CC_3419
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
 0.418
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.