Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0252 | CC_1872 | CC_0252 | CC_1872 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.717 |
| CC_0252 | CC_1875 | CC_0252 | CC_1875 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.955 |
| CC_0252 | CC_3277 | CC_0252 | CC_3277 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.911 |
| CC_0252 | dipM | CC_0252 | CC_1996 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.716 |
| CC_0252 | mltG | CC_0252 | CC_1679 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.740 |
| CC_1871 | CC_1872 | CC_1871 | CC_1872 | Bacterioferritin comigratory protein; Identified by match to PFAM protein family HMM PF00578. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.825 |
| CC_1871 | CC_3022 | CC_1871 | CC_3022 | Bacterioferritin comigratory protein; Identified by match to PFAM protein family HMM PF00578. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.409 |
| CC_1871 | bacA | CC_1871 | CC_1873 | Bacterioferritin comigratory protein; Identified by match to PFAM protein family HMM PF00578. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.787 |
| CC_1872 | CC_0252 | CC_1872 | CC_0252 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.717 |
| CC_1872 | CC_1871 | CC_1872 | CC_1871 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Bacterioferritin comigratory protein; Identified by match to PFAM protein family HMM PF00578. | 0.825 |
| CC_1872 | CC_1875 | CC_1872 | CC_1875 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.720 |
| CC_1872 | CC_2297 | CC_1872 | CC_2297 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.733 |
| CC_1872 | CC_3022 | CC_1872 | CC_3022 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.830 |
| CC_1872 | CC_3277 | CC_1872 | CC_3277 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.685 |
| CC_1872 | PBP1a | CC_1872 | CC_1516 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.694 |
| CC_1872 | bacA | CC_1872 | CC_1873 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.960 |
| CC_1872 | dipM | CC_1872 | CC_1996 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.514 |
| CC_1872 | mltG | CC_1872 | CC_1679 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.582 |
| CC_1875 | CC_0252 | CC_1875 | CC_0252 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.955 |
| CC_1875 | CC_1872 | CC_1875 | CC_1872 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.720 |
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