Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0252 | CC_1546 | CC_0252 | CC_1546 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein 2; Identified by match to protein family HMM. | 0.701 |
| CC_0252 | CC_1872 | CC_0252 | CC_1872 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.717 |
| CC_0252 | CC_1875 | CC_0252 | CC_1875 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.955 |
| CC_0252 | CC_1876 | CC_0252 | CC_1876 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.436 |
| CC_0252 | CC_2161 | CC_0252 | CC_2161 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | D-alanyl-D-alanine carboxypeptidase; Identified by match to PFAM protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.923 |
| CC_0252 | CC_2560 | CC_0252 | CC_2560 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.579 |
| CC_0252 | CC_3277 | CC_0252 | CC_3277 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.911 |
| CC_0252 | mltG | CC_0252 | CC_1679 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.740 |
| CC_0252 | mrdB | CC_0252 | CC_1547 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.656 |
| CC_0252 | murC | CC_0252 | CC_2546 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.695 |
| CC_1546 | CC_0252 | CC_1546 | CC_0252 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.701 |
| CC_1546 | CC_1875 | CC_1546 | CC_1875 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.768 |
| CC_1546 | CC_2161 | CC_1546 | CC_2161 | Penicillin-binding protein 2; Identified by match to protein family HMM. | D-alanyl-D-alanine carboxypeptidase; Identified by match to PFAM protein family HMM PF00768; Belongs to the peptidase S11 family. | 0.733 |
| CC_1546 | CC_2560 | CC_1546 | CC_2560 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Identified by match to protein family HMM. | 0.939 |
| CC_1546 | CC_3277 | CC_1546 | CC_3277 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.721 |
| CC_1546 | mltG | CC_1546 | CC_1679 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.495 |
| CC_1546 | mrdB | CC_1546 | CC_1547 | Penicillin-binding protein 2; Identified by match to protein family HMM. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.999 |
| CC_1546 | murC | CC_1546 | CC_2546 | Penicillin-binding protein 2; Identified by match to protein family HMM. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.610 |
| CC_1872 | CC_0252 | CC_1872 | CC_0252 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.717 |
| CC_1872 | CC_1875 | CC_1872 | CC_1875 | Peptidase, M23/M37 family; Identified by match to protein family HMM. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.720 |
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