Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_1875 | CC_1876 | CC_1875 | CC_1876 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.763 |
| CC_1875 | CC_3232 | CC_1875 | CC_3232 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | 0.429 |
| CC_1875 | dipM | CC_1875 | CC_1996 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.624 |
| CC_1875 | ftsA | CC_1875 | CC_2541 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.465 |
| CC_1875 | mltG | CC_1875 | CC_1679 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.709 |
| CC_1875 | murA | CC_1875 | CC_2350 | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.689 |
| CC_1876 | CC_1875 | CC_1876 | CC_1875 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.763 |
| CC_1876 | CC_2627 | CC_1876 | CC_2627 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Identified by match to protein family HMM. | 0.732 |
| CC_1876 | CC_3232 | CC_1876 | CC_3232 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | 0.759 |
| CC_1876 | CC_3322 | CC_1876 | CC_3322 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Peptidoglycan-binding protein, putative; Identified by match to protein family HMM. | 0.481 |
| CC_1876 | CC_3434 | CC_1876 | CC_3434 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.664 |
| CC_1876 | CC_3705 | CC_1876 | CC_3705 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.712 |
| CC_1876 | dipM | CC_1876 | CC_1996 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Peptidase, M23/M37 family; Identified by match to protein family HMM. | 0.831 |
| CC_1876 | ftsA | CC_1876 | CC_2541 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.471 |
| CC_1876 | mltG | CC_1876 | CC_1679 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.503 |
| CC_1876 | murA | CC_1876 | CC_2350 | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.494 |
| CC_2627 | CC_1876 | CC_2627 | CC_1876 | Identified by match to protein family HMM. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.732 |
| CC_2627 | mltG | CC_2627 | CC_1679 | Identified by match to protein family HMM. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.423 |
| CC_3232 | CC_1875 | CC_3232 | CC_1875 | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | Penicillin-binding protein, 1A family; Identified by match to protein family HMM. | 0.429 |
| CC_3232 | CC_1876 | CC_3232 | CC_1876 | ExbD/TolR family protein; Similar to PID:1103861 SP:P50599; identified by sequence similarity; putative. | N-acetylmuramoyl-L-alanine amidase; Identified by match to PFAM protein family HMM PF01520. | 0.759 |
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