STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1907Identified by match to protein family HMM. (87 aa)    
Predicted Functional Partners:
CC_1908
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.851
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (By similarity); Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.834
flgG
Flagellar basal-body rod protein FlgG; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
 
 0.828
flgF
Flagellar basal-body rod protein FlgF; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
 
 0.825
fliP
Flagellar biosynthesis protein FliP; May be a component of the flagellum. It is required for normal cell division. May be implicated in the secretion of virulence factors; Belongs to the FliP/MopC/SpaP family.
 
  
 0.812
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). Belongs to the FliN/MopA/SpaO family.
 
  
 0.804
flgE
Flagellar hook protein; Identified by match to protein family HMM.
 
 
 0.796
FlgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM; Belongs to the flagella basal body rod proteins family.
 
    0.790
fliI
Flagellum-specific ATP synthase FliI; Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum.
 
    0.787
fliR
Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis; Belongs to the FliR/MopE/SpaR family.
 
  
 0.781
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.