STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1932Hypothetical protein; Identified by Glimmer2; putative. (86 aa)    
Predicted Functional Partners:
CC_1933
Lactoylglutathione lyase, putative; Identified by match to protein family HMM.
       0.810
CC_3730
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.701
CC_3401
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.629
CC_0248
Sensor histidine kinase; Identified by match to protein family HMM.
  
     0.619
rcdA
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.603
CC_3115
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.597
CC_1934
Identified by match to PFAM protein family HMM PF02147.
       0.564
coaX
Transcriptional activator, putative, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
       0.564
CC_1936
Biotin protein ligase; Identified by match to protein family HMM.
       0.564
nuoN
NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.564
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.