STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1966Hypothetical protein; Identified by Glimmer2; putative. (189 aa)    
Predicted Functional Partners:
CC_1967
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.823
nnrE
YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
  
    0.819
CC_0356
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.672
CC_0244
Hydrolase, haloacid dehalogenase-like family; Identified by match to PFAM protein family HMM PF00702.
  
    0.558
CC_2961
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.507
CC_1232
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.497
CC_1800
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.493
CC_2128
Gluconolactonase, putative; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
 
  
 0.479
CC_3607
Glutamate synthase, large subunit; Identified by match to PFAM protein family HMM PF01645.
     
 0.476
CC_0074
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.462
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.