CC_1986 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

CC_1986

Identified by match to protein family HMM. (683 aa)

Predicted Functional Partners:

CC_2579

0.655

CC_3107

0.652

CC_2840

0.523

CC_1099

0.513

CC_2544

0.510

CC_3086

0.495

CC_3013

0.480

CC_0925

0.446

CC_0311

0.435

CC_1623

0.431

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CC_0311	CC_1986	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.435
CC_0925	CC_1986	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	Identified by match to protein family HMM.	0.446
CC_0925	CC_2544	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	Aminopeptidase, putative; Similar to GP:3386478; identified by sequence similarity; putative.	0.451
CC_0925	CC_2579	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	Identified by match to protein family HMM.	0.629
CC_0925	CC_2840	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.620
CC_0925	CC_3013	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	TonB-dependent receptor; Identified by match to protein family HMM.	0.479
CC_0925	CC_3107	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	Peptidase, M20/M25/M40 family; Identified by match to protein family HMM.	0.567
CC_1099	CC_1986	TonB-dependent receptor; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.513
CC_1099	CC_2579	TonB-dependent receptor; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.535
CC_1099	CC_2840	TonB-dependent receptor; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.538
CC_1099	CC_3107	TonB-dependent receptor; Identified by match to protein family HMM.	Peptidase, M20/M25/M40 family; Identified by match to protein family HMM.	0.556
CC_1623	CC_1986	TonB-dependent receptor; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.431
CC_1623	CC_2544	TonB-dependent receptor; Identified by match to protein family HMM.	Aminopeptidase, putative; Similar to GP:3386478; identified by sequence similarity; putative.	0.496
CC_1623	CC_2579	TonB-dependent receptor; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.563
CC_1623	CC_2840	TonB-dependent receptor; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.594
CC_1623	CC_3107	TonB-dependent receptor; Identified by match to protein family HMM.	Peptidase, M20/M25/M40 family; Identified by match to protein family HMM.	0.666
CC_1986	CC_0311	Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.435
CC_1986	CC_0925	Identified by match to protein family HMM.	OmpA-related protein; Similar to SP:P38370 GB:S64103 PID:402804; identified by sequence similarity; putative.	0.446
CC_1986	CC_1099	Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.513
CC_1986	CC_1623	Identified by match to protein family HMM.	TonB-dependent receptor; Identified by match to protein family HMM.	0.431