STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_2016Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM. (341 aa)    
Predicted Functional Partners:
CC_0770
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM.
 
 
 0.633
CC_3428
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM.
   
 
 0.616
CC_0299
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.588
CC_2015
Oxidoreductase, Gfo/Idh/MocA family; Identified by match to protein family HMM.
  
    0.564
CC_1233
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.547
CC_0916
Organic hydroperoxide resistance protein; Similar to SP:O68390; identified by sequence similarity; putative.
  
 0.540
CC_1435
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.478
CC_1569
NADP-dependent quinone oxidoreductase, putative; Identified by match to protein family HMM.
 
 
0.469
CC_2353
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM.
 
 
 0.469
argG
Argininosuccinate synthase; Identified by match to TIGR protein family HMM TIGR00032; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
   0.440
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.