STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2023Conserved hypothetical protein; Identified by Glimmer2; putative. (347 aa)    
Predicted Functional Partners:
CC_2022
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_1633
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.764
CC_1226
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.720
CC_1082
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.673
CC_1224
Gluconolactonase; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
  
     0.664
CC_2313
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.634
CC_3346
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.606
CC_1628
Membrane protein, putative; Identified by match to protein family HMM.
  
    0.596
CC_0798
Sialic acid-specific 9-O-acetylesterase, putative; Similar to GB:U40408 PID:1373055 PID:1628565 PID:1668766; identified by sequence similarity; putative.
 
     0.558
CC_3042
Endo-1,4-beta-xylanase; Identified by match to protein family HMM.
  
     0.543
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.