Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CC_1534 | CC_2032 | Aspartate aminotransferase; Identified by match to protein family HMM. | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | 0.900 |
CC_1534 | CC_2033 | Aspartate aminotransferase; Identified by match to protein family HMM. | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | 0.900 |
CC_2030 | CC_2031 | Hypothetical protein; Identified by Glimmer2; putative. | TPR domain protein; Identified by match to protein family HMM. | 0.762 |
CC_2030 | CC_2032 | Hypothetical protein; Identified by Glimmer2; putative. | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | 0.470 |
CC_2030 | CC_2033 | Hypothetical protein; Identified by Glimmer2; putative. | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | 0.459 |
CC_2031 | CC_2030 | TPR domain protein; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.762 |
CC_2031 | CC_2032 | TPR domain protein; Identified by match to protein family HMM. | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | 0.485 |
CC_2031 | CC_2033 | TPR domain protein; Identified by match to protein family HMM. | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | 0.465 |
CC_2032 | CC_1534 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | Aspartate aminotransferase; Identified by match to protein family HMM. | 0.900 |
CC_2032 | CC_2030 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.470 |
CC_2032 | CC_2031 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | TPR domain protein; Identified by match to protein family HMM. | 0.485 |
CC_2032 | CC_2033 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | 0.832 |
CC_2032 | CC_3106 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | Threonine aldolase family protein; Similar to GP:3299792; identified by sequence similarity; putative. | 0.401 |
CC_2033 | CC_1534 | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | Aspartate aminotransferase; Identified by match to protein family HMM. | 0.900 |
CC_2033 | CC_2030 | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.459 |
CC_2033 | CC_2031 | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | TPR domain protein; Identified by match to protein family HMM. | 0.465 |
CC_2033 | CC_2032 | Aspartate racemase; Identified by match to TIGR protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | 0.832 |
CC_3106 | CC_2032 | Threonine aldolase family protein; Similar to GP:3299792; identified by sequence similarity; putative. | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM. | 0.401 |