CC_2050 protein (Caulobacter vibrioides CB15)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

CC_2050

Identified by match to PFAM protein family HMM PF00441. (377 aa)

Predicted Functional Partners:

CC_2478

0.976

CC_2049

0.969

CC_1310

0.929

CC_1806

0.926

CC_1813

0.868

CC_2131

0.817

CC_3462

0.759

CC_3189

0.753

CC_0726

0.747

CC_0076

0.744

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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node1	node2	node1 annotation	node2 annotation	score
CC_0076	CC_0726	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	0.732
CC_0076	CC_1310	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.742
CC_0076	CC_1806	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.742
CC_0076	CC_1813	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00378.	0.804
CC_0076	CC_2049	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.742
CC_0076	CC_2050	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.744
CC_0076	CC_2131	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.742
CC_0076	CC_2478	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to PFAM protein family HMM PF00441.	0.744
CC_0076	CC_3189	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.956
CC_0076	CC_3462	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	Identified by match to protein family HMM; Belongs to the thiolase-like superfamily. Thiolase family.	0.996
CC_0726	CC_0076	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.732
CC_0726	CC_1310	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.614
CC_0726	CC_1806	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.675
CC_0726	CC_1813	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00378.	0.732
CC_0726	CC_2049	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.614
CC_0726	CC_2050	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.747
CC_0726	CC_2131	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.611
CC_0726	CC_2478	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Identified by match to PFAM protein family HMM PF00441.	0.683
CC_0726	CC_3189	Electron transfer flavoprotein, alpha subunit; Identified by match to PFAM protein family HMM PF00766.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.736
CC_1310	CC_0076	Identified by match to PFAM protein family HMM PF00441.	Fatty oxidation complex, alpha subunit; Identified by match to PFAM protein family HMM PF00725.	0.742

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