STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2075Hypothetical protein; Identified by Glimmer2; putative. (470 aa)    
Predicted Functional Partners:
CC_2076
Transcriptional regulator, Cro/CI family; Identified by match to protein family HMM.
     
 0.764
ftsK
Cell division protein FtsK, putative; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the directi [...]
   
 
 0.685
CC_0345
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.582
CC_0746
Alkaline metalloproteinase, putative; Identified by match to PFAM protein family HMM PF00353.
 
 
 0.565
CC_1163
Acyl carrier protein, putative; Identified by match to PFAM protein family HMM PF00550.
  
 
 0.556
CC_1604
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.540
CC_2077
Identified by match to protein family HMM.
       0.513
CC_2078
Hypothetical protein; Identified by Glimmer2; putative.
       0.513
CC_2610
Identified by match to PFAM protein family HMM PF00353.
 
 
 0.507
CC_2743
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.490
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.