CC_2091 protein (Caulobacter vibrioides CB15)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Score

CC_2091

ABC transporter, ATP-binding protein; Identified by match to protein family HMM. (249 aa)

Predicted Functional Partners:

CC_2090

0.982

pstB

0.919

CC_1440

0.847

CC_2092

0.837

CC_0931

0.801

CC_1930

0.801

CC_0329

0.780

rsmA

0.694

CC_0305

0.670

rplE

0.631

Your Current Organism:

Caulobacter vibrioides CB15

NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC_0305	CC_2091	CC_0305	CC_2091	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.670
CC_0305	rsmA	CC_0305	CC_1685	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.442
CC_0329	CC_2091	CC_0329	CC_2091	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.780
CC_0329	pstB	CC_0329	CC_0292	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.534
CC_0931	CC_1930	CC_0931	CC_1930	Conserved hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.925
CC_0931	CC_2091	CC_0931	CC_2091	Conserved hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.801
CC_1440	CC_2091	CC_1440	CC_2091	Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.847
CC_1440	pstB	CC_1440	CC_0292	Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM.	Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.910
CC_1930	CC_0931	CC_1930	CC_0931	Conserved hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.925
CC_1930	CC_2091	CC_1930	CC_2091	Conserved hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.801
CC_2090	CC_2091	CC_2090	CC_2091	Hypothetical protein; Identified by Glimmer2; putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	0.982
CC_2090	CC_2092	CC_2090	CC_2092	Hypothetical protein; Identified by Glimmer2; putative.	Identified by match to protein family HMM.	0.962
CC_2091	CC_0305	CC_2091	CC_0305	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	ABC transporter, HlyB/MsbA family; Identified by match to protein family HMM.	0.670
CC_2091	CC_0329	CC_2091	CC_0329	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.780
CC_2091	CC_0931	CC_2091	CC_0931	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.801
CC_2091	CC_1440	CC_2091	CC_1440	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Cystine ABC tranporter, permease protein, putative; Identified by match to protein family HMM.	0.847
CC_2091	CC_1930	CC_2091	CC_1930	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Conserved hypothetical protein; Identified by Glimmer2; putative.	0.801
CC_2091	CC_2090	CC_2091	CC_2090	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Hypothetical protein; Identified by Glimmer2; putative.	0.982
CC_2091	CC_2092	CC_2091	CC_2092	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Identified by match to protein family HMM.	0.837
CC_2091	pstB	CC_2091	CC_0292	ABC transporter, ATP-binding protein; Identified by match to protein family HMM.	Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.919