Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_2103Conserved hypothetical protein; Identified by Glimmer2; putative. (157 aa)    
Predicted Functional Partners:
CC_2102
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.779
CC_2104
Hypothetical protein; Identified by Glimmer2; putative.
       0.779
CC_1663
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
     0.650
CC_3194
TonB-dependent receptor; Similar to GP:9105165; identified by sequence similarity; putative.
  
    0.589
CC_2105
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.556
CC_0356
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.451
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.411
CC_2106
Hypothetical protein; Identified by Glimmer2; putative.
       0.410
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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