STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_2156Conserved hypothetical protein; Identified by Glimmer2; putative. (385 aa)    
Predicted Functional Partners:
CC_2158
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.784
CC_2157
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.777
nadE
NAD(+) synthetase, putative; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
      0.730
bpt
Conserved hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.603
CC_2159
Hypothetical protein; Identified by Glimmer2; putative.
       0.538
CC_2085
Glutathione S-transferase; Identified by match to protein family HMM.
  
    0.515
CC_2160
Hypothetical protein; Identified by Glimmer2; putative.
       0.448
CC_2484
Identified by match to protein family HMM.
 
     0.417
CC_3345
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM.
  
    0.403
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.