Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC_2157Conserved hypothetical protein; Identified by Glimmer2; putative. (257 aa)    
Predicted Functional Partners:
CC_2158
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.788
CC_2156
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.777
CC_1223
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.677
CC_2159
Hypothetical protein; Identified by Glimmer2; putative.
       0.545
CC_1504
MIP family protein; Identified by match to PFAM protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.525
CC_2160
Hypothetical protein; Identified by Glimmer2; putative.
       0.453
HisZ
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.453
CC_0291
Phosphate ABC transporter, permease protein; Identified by match to protein family HMM.
  
  
 0.429
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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